Functional annotation of Augustus results

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katharina
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Functional annotation of Augustus results

Postby katharina » Fri Nov 20, 2015 12:23 pm

Originally posted in the old forum by cartal on 06.12.2013 - 20:13

Hi
I have been using Augustus with a non-model organism for a while and it have given me good results. Now, I would like to ask what is the best way to functional annotate the resulting GFF file.
I have tried annotate-gff(https://github.com/PalMuc/Annotate-GFF) but it doesn't give the results I expected.
Is there any built in functionality for this?
Thank you
Katharina

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katharina
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Re: Functional annotation of Augustus results

Postby katharina » Fri Nov 20, 2015 12:23 pm

by katharina on 07.12.2013 - 18:38
AUGUSTUS is a tool for structural annotation, only. I know of no super easy way to functionally annotate the gene set predicted by AUGUSTUS.
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