Originally posted in the old forum by ebioman on 06.01.2015 - 11:28
Hello
I was wondering how Augustus prediction handles situations were more than one
methionine is present near the "start" of a protein. How does it evaluate
which one is the proper one, based on codon usage or first one serves first ?
Start Methionine
Moderator: bioinf
Re: Start Methionine
by katharina on 06.01.2015 - 11:53
It's not first one serves first. AUGUSTUS has a model for gene start regions. I would't call it codon usage, rather sequence content. Maybe Mario will further comment on this.
It's not first one serves first. AUGUSTUS has a model for gene start regions. I would't call it codon usage, rather sequence content. Maybe Mario will further comment on this.