Tribolium castaneum (Assembly 3.0): 2.001 kbp from ChLG10:11,269,000..11,271,000

Examples

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DNA/GC Content

Experimental Data

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Adult Female Antenna [?]	EST alignments (BLAT against masked)	Larval Head [?]
Adult Female Body [?]	GT_s1_ctl [?]	Read Coverage [?]
Adult Female Head [?]	GT_s2_tthr [?]	Read Coverage (formerly) [?]
Adult Female Leg [?]	GT_s3_mthr [?]	Read Coverage (zoomed in) [?]
Adult Male Antenna [?]	GT_s4_fthr [?]	Read Coverage embryo cologne [?]
Adult Male Body [?]	GT_s5_mabd [?]	Read Coverage, iBeetle Embryonic [?]
Adult Male Head [?]	GT_s6_fabd [?]	Read Coverage, iBeetle late larval & pupal [?]
Adult Male Leg [?]	Larval Body [?]

General

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"safe" mRNA fragments, first, second and third batch [?]	makeUTR	OGS [?]
AUGUSTUS ab initio with Tribolium parameters including UTR [?]	new mRNA fragments	polyA hints [?]
dsRNA templates suggested by ERNAi [?]	non overlapping fragments [?]	RNAi templates [?]

Predictions

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AUGUSTUS2 prediction with UTR and hints	genes from AUGUSTUS2 without Templates [?]	NCBI annotation [?]
evidentialGene [?]	intron hints AUGUSTUS2

Predictions (preliminary)

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AUGUSTUS (UTR and hints from cDNA)	AUGUSTUS (UTR and w/o hints)
AUGUSTUS (UTR and hints from cDNA, revised)	AUGUSTUS (UTR and w/o hints, revised)

Proteins

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6-frame translation

Test

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Dros homologs and Tcas paralogs [?]

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Cache tracks		Highlight regions (region1:start..end region2:start..end) Clear highlighting
Show tooltips		Region Size (bp)

Please rather use now the iBeetle server at the University of Göttingen.

Landmark or Region: Examples: ChLG5:8857000..8869999, ChLG10:11269000..11271000, TC012345, iB_00977, b3.ds338.
Data Source Tribolium castaneum (Assembly 3.0)	Scroll/Zoom: Flip