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by Jung
Mon May 08, 2017 4:35 am
Forum: Predicting Genes with AUGUSTUS
Topic: bam2hints created an empty gff file
Replies: 1
Views: 2389

bam2hints created an empty gff file

Dear all, I am trying ab-initio gene prediction on my species. According to this page (http://bioinf.uni-greifswald.de/bioinf/wiki/pmwiki.php?n=IncorporatingRNAseq.Tophat), I attempted to get intron hints from several sets of RNAseq data, but at step 11, bam2hints created an empty .gff file. I think...