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by ssully
Tue May 14, 2019 10:25 pm
Forum: BRAKER
Topic: stranded RNAseq and BRAKER
Replies: 0
Views: 3808

stranded RNAseq and BRAKER

I have a large paired-end RNAseq library for my organism, prepared with a stranded protocol . I have a single BAM file that was created by mapping those reads to my organism's new genome (using BWA mem). The BRAKER manual says BRAKER can exploit RNAseq library strandedness ...for UTR training and pr...