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by swarbred
Thu Sep 02, 2021 1:14 pm
Forum: Predicting Genes with AUGUSTUS
Topic: ab initio prediction of non-canonical splice sites
Replies: 0
Views: 360

ab initio prediction of non-canonical splice sites

We are annotating species where we anticipate a substantial percentage of non-canonical splicing e.g. ga-ag I wondered if there were any updates to augustus to support ab intio prediction of splice sites outside of gt-ag and gc-ag. I'm aware there is support for annotating non-canonical sites via hi...