how to use webAUGUSTUS-derived parameters in local version
Moderator: bioinf
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- Posts: 3
- Joined: Sun Dec 12, 2021 5:19 pm
how to use webAUGUSTUS-derived parameters in local version
I ran the training for my species of interest on webAUGUSTUS, now I would like to know how I can use the results of this training in AUGUSTUS local version. Thanks, kind regards.
Re: how to use webAUGUSTUS-derived parameters in local version
- download the "Species parameter archive" (parameters.tar.gz) from the webAUGUSTUS training page
- unpack parameters.tar.gz and place the contained folder into the
- local Augustus "Species" folder (probably in config/species)
- use the folder name as argument for the augustus --species parameter
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- Posts: 3
- Joined: Sun Dec 12, 2021 5:19 pm
Re: how to use webAUGUSTUS-derived parameters in local version
thank you very much for your reply!