Augustus prediction with RNASeq Hints
Posted: Fri Nov 20, 2015 12:51 pm
Originally posted in the old forum by Kumar on 18.03.2013 - 16:28
Hi,
I are working on an insect genome re-annotation. Initially ~17000 gene-models were predicted with Glean. In my ab-initio predictions with Augustus I found 200 more gene-models in compare to Glean (that was okay). But when I added the hints generated from unassembled RNASeq data, I got almost "2500" more gene-models. I wonder if I have drawn any mistake?
Thank you!
Kumar
Hi,
I are working on an insect genome re-annotation. Initially ~17000 gene-models were predicted with Glean. In my ab-initio predictions with Augustus I found 200 more gene-models in compare to Glean (that was okay). But when I added the hints generated from unassembled RNASeq data, I got almost "2500" more gene-models. I wonder if I have drawn any mistake?
Thank you!
Kumar