AUGUSTUS Forum

Originally posted in the old forum by Julie on 24.08.2012 - 12:09
Hello,
I used the RNAseq data to improve the genome annotation (BLAT-based pipeline) as described in http://bioinf.uni-greifswald.de/bioinf/ ... s.Augustus
Now I am writing the manuscript and I am not sure how to cite it properly.
Could you help me?

by Mario on 03.09.2012 - 11:04
For this purpose, please cite this paper.
Mario Stanke, Mark Diekhans, Robert Baertsch, David Haussler (2008)
Using native and syntenically mapped cDNA alignments to improve de novo gene finding
Bioinformatics, doi: 10.1093/bioinformatics/btn013
http://bioinformatics.oxfordjournals.or ... ZBiTC5VhDS
This is for general purpose hint integration also.