Re: RNA-Seq based prediction
Posted: Thu Nov 19, 2015 7:50 pm
by Mbandi on 30.10.2014 - 14:47
hints from multiple BAM files
Hi,
I was wondering if it makes sense to generate hints separately from multiple BAM files and merge the hints. Does read coverage play a role in generating hints? If this is the case, then reads that support one intron junction could be located in separate file. Would it then not be appropriate to merge BAM files prior to generating hints?
hints from multiple BAM files
Hi,
I was wondering if it makes sense to generate hints separately from multiple BAM files and merge the hints. Does read coverage play a role in generating hints? If this is the case, then reads that support one intron junction could be located in separate file. Would it then not be appropriate to merge BAM files prior to generating hints?