FeatureCollection::esource: invalid source key: P

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katharina
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FeatureCollection::esource: invalid source key: P

Post by katharina »

Originally posted in the old forum by Sam on 13.06.2014 - 18:58
Hi,
I got this error running augustus supplying EST hints and protein hints obtained from exonerate output.

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FeatureCollection::esource: invalid source key: P
augustus: ERROR
        FeatureCollection::esource: invalid source key: P
Here's is how I got hints from exonerate:

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exonerate2hints.pl --priority=3 --source=P --in=F001_exonerate.out --out=F001_exonerate_hints.gff
If I don't specify "source=P", the default source it adds is "src=XNT" in the hints file.
In the extrinsic.cfg file, I added "P" to indicate protein hints.
I would appreciate your input on this. Thank you.
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katharina
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Re: FeatureCollection::esource: invalid source key: P

Post by katharina »

by Sam on 13.06.2014 - 20:21
FeatureCollection::esource: invalid source key: P
I found the answer. I had not added "P" as one of the sources in the extrinsic.cfg file. Thank you.
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