Augustus installation error in Mac OSX 10.10.4
Posted: Thu Nov 19, 2015 1:45 pm
Originally posted by Evoe on 19.07.2015 - 17:12
I have a problem in installing augustus-3.1 on Mac OSX10.10.4.
When I execute the Makefile, I got this kind of error message:
How can I solve this problem?
I have a problem in installing augustus-3.1 on Mac OSX10.10.4.
When I execute the Makefile, I got this kind of error message:
Code: Select all
g++ -c -Wall -Wno-sign-compare -ansi -pedantic -O3 -DZIPINPUT -o genbank.o genbank.cc -I../include
In file included from genbank.cc:15:
In file included from ../include/genbank.hh:19:
In file included from ../include/gene.hh:16:
../include/hints.hh:147:7: warning: equality comparison result unused [-Wunused-comparison]
name == "";
~~~~~^evoe? July 19, 2015, at 05:12 PM
../include/hints.hh:147:7: note: use '=' to turn this equality comparison into an assignment
name == "";
^~
=
In file included from genbank.cc:15:
In file included from ../include/genbank.hh:19:
../include/gene.hh:369:10: warning: 'Gene::almostIdenticalTo' hides overloaded virtual function [-Woverloaded-virtual]
bool almostIdenticalTo(Gene *other);
^
../include/gene.hh:295:18: note: hidden overloaded virtual function 'Transcript::almostIdenticalTo' declared here: type mismatch at 1st parameter
('Transcript *' vs 'Gene *')
virtual bool almostIdenticalTo(Transcript *other);
^
../include/gene.hh:386:10: warning: 'Gene::printEvidence' hides overloaded virtual function [-Woverloaded-virtual]
void printEvidence();
^
../include/gene.hh:300:18: note: hidden overloaded virtual function 'Transcript::printEvidence' declared here: different qualifiers (const vs none)
virtual void printEvidence() const {}; // implemented only for coding genes
^
In file included from genbank.cc:15:
../include/genbank.hh:26:10: fatal error: 'boost/iostreams/filtering_stream.hpp' file not found
include <boost/iostreams/filtering_stream.hpp>
^
3 warnings and 1 error generated.
make: *** [genbank.o] Error 1