while trying to compile I am running into some issues with samtools. I cloned samtools from github. Samtools run fine, but while trying to compile bam2wig from AUGUSTUS auxprogs it is missing folders/libraries, e.g. below. Did I clone the wrong samtools? In https://github.com/samtools/htslib, I as well cannot find a bgzf.h?
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jfk@undecan:$ make gcc -g -Wall -O2 -I/home/software/src/samtool/samtools/ -I. -c bam2wig.c -o bam2wig.o -I/home/software/src/samtool/samtools/ -I. In file included from /home/software/src/samtool/samtools/sam.h:5:0, from bam2wig.c:18: /home/software/src/samtool/samtools/bam.h:54:25: fatal error: htslib/bgzf.h: No such file or directory compilation terminated. make: *** [bam2wig.o] Error 1