Training AUGUSTUS
Job trainExample
Please bookmark this page! Training AUGUSTUS may take up to several weeks depending on the input data properties. Bookmarking this page ensures that you will be able to return to this page in order to find the results of your job, later.
Job Status
Job submitted → waiting for execution → computing → finished!
Results
Log-file AutoAug.log
Error-file AutoAug.err
Species parameter archive parameters.tar.gz
Training genes training.gb.gz
Ab initio predictions ab_initio.tar.gz
Instructions
Please download the files listed above by clicking on the links.
All files and folders (except for the *.log and *.err file) are compressed. To unpack *.tar.gz archives, e.g. on linux type
tar -xzvf *.tar.gz
For unpacking *.gz files, e.g. on linux type
gunzip *.gz.
Further instructions about results contents are given at the Training Tutorial and the Prediction Tutorial. Typical error messages from the log files are explained at Help.
Messages
---------------------------------------- Wed Sep 18 12:29:26 CEST 2019 - Message: ---------------------------------------- Details of your job: Training job ID: trainExample Species name: Mus_musculus_1.6.2 Genome file: http://bioinf.uni-greifswald.de/trainaugustus/examples/chr1to6.fa Protein file: http://bioinf.uni-greifswald.de/trainaugustus/examples/rattusProteinsChr1to6.fa ---------------------------------------- Wed Sep 18 12:30:36 CEST 2019 - Message: ---------------------------------------- We have retrieved all files that you specified, successfully. You may delete them from the public server, now, without affecting the AUGUSTUS training job. ---------------------------------------- Thu Sep 19 23:45:35 CEST 2019 - Message: ---------------------------------------- Your AUGUSTUS training job trainExample finished.